Huh! This is an interesting read! I dove in a bit and did some research but it looks like it's still something that needs further investigation. Without a doctor and expensive tests it's hard to tell what bacteria you're lacking and what you need to help complete the system. It's also hard to destroy the biofilms created around the bacterias.
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You could be right The point is that if somebody isn't eating enough prebiotic fiber, they won't have a healthy gut ecosystem because that's what the good bacteria eat. The body is pretty good at knowing what it needs if given half a chance. Obviously, if somebody has a severe illness, they need a doctor. Also, if you feed the good bacteria, they will do the job of crowding out the bad bacteria. You should write a post on your ideas. I'd love to read it.